Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs78540406 chr8:19202941 C/T 0.000106 118 38.58 46.07 12.77 KM Plot
THYM rs78547197 chr1:227486057 A/AT 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs7856786 chr9:97170095 A/G 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs78572591 chr4:70110989 G/A 4.7E-13 119 41.77 35 6 KM Plot
THYM rs78576520 chr9:97241188 C/A 8.42E-5 119 40.67 46.07 17.03 KM Plot
THYM rs7858126 chr9:97261887 C/T 7.76E-5 118 39.75 46.07 17.03 KM Plot
THYM rs78584760 chr4:70039575 A/G 7.82E-13 117 39.75 42.3 6 KM Plot
THYM rs78592129 chr4:70273023 T/A 4.8E-13 119 41.22 42.3 6 KM Plot
THYM rs7859571 chr9:97131885 C/T 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs7859955 chr9:97170118 T/C 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs7868600 chr9:97260370 T/C 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs78687006 chr11:20032176 G/A 4.03E-6 118 42.73 32.7 13.75 KM Plot
THYM rs7868703 chr9:97243786 A/G 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs7869096 chr9:98522513 C/T 9.05E-9 115 39.75 39.2 34.87 KM Plot
THYM rs7873527 chr9:97231752 T/C 7.08E-5 119 39.75 45.87 17.03 KM Plot